BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E11SP1|AL425144
(1006 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1428 1964 0.0
>3x_Contig1428
Length = 9146
Score = 1964 bits (990), Expect = 0.0
Identities = 1001/1004 (99%), Gaps = 1/1004 (0%)
Strand = Plus / Plus
Query: 1 gatccaattctcttaccgatggtgtttcggatgtttcaggtttccccggttcacgtttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2583 gatccaattctcttaccgatggtgtttcggatgtttcaggtttccccggttcacgtttct 2642
Query: 61 gacataataaagaccttctatttaccggtattctggaccttttggtcctgggcatctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2643 gacataataaagaccttctatttaccggtattctggaccttttggtcctgggcatctttt 2702
Query: 121 tgttgcttatgaataagaaaaaatagctgaaaggaaaccgaagcttgatccatcttcgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2703 tgttgcttatgaataagaaaaaatagctgaaaggaaaccgaagcttgatccatcttcgcc 2762
Query: 181 tcattaggtaatactttgttcagagtaacccgtaaccgcaactgcgtagttcctgtagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2763 tcattaggtaatactttgttcagagtaacccgtaaccgcaactgcgtagttcctgtagat 2822
Query: 241 tatttagttggtggttggatttccccatcactattggatatgtccagtgacgggagattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2823 tatttagttggtggttggatttccccatcactattggatatgtccagtgacgggagattg 2882
Query: 301 gaaagtgcaaaaaaaacaaaataaagaaaaaagagccagttatcagcatgagctttcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2883 gaaagtgcaaaaaaaacaaaataaagaaaaaagagccagttatcagcatgagctttcctt 2942
Query: 361 tcggatatgacatcacttggcctatggatcctagtatcatgtatatctcggggagagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2943 tcggatatgacatcacttggcctatggatcctagtatcatgtatatctcggggagagcct 3002
Query: 421 caacgctcggcatctggaattgatttcctactaccggctgggaggccttattgaatattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3003 caacgctcggcatctggaattgatttcctactaccggctgggaggccttattgaatattc 3062
Query: 481 ttaccccttcaaaggggcccagataatgccgtaataatcggttttaggaactgggaatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3063 ttaccccttcaaaggggcccagataatgccgtaataatcggttttaggaactgggaatca 3122
Query: 541 cgtgatgtcacgtgatttccagttcacgtaaatgatattcctctttcctttacctacagg 600
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3123 cgtgatgtcacgtgattcccagttcacgtaaatgatattcctctttcctttacctacagg 3182
Query: 601 ttatggcatttacactatatcctgtatagaacaaggcgttgtttattttgcagcacagag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3183 ttatggcatttacactatatcctgtatagaacaaggcgttgtttattttgcagcacagag 3242
Query: 661 cacgacatgtagccgatagccagcactgtcagccaattttactcaacttctcatggatgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3243 cacgacatgtagccgatagccagcactgtcagccaattttactcaacttctcatggatgc 3302
Query: 721 tttgaagcaacgacatttgaagttgctgtacaggcagcgtggtagtgcttcaagaactat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3303 tttgaagcaacgacatttgaagttgctgtacaggcagcgtggtagtgcttcaagaactat 3362
Query: 781 tgattacgatgtggtaattgaaccagagttgagagaagatggcgatttggttacagatag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3363 tgattacgatgtggtaattgaaccagagttgagagaagatggcgatttggttacagatag 3422
Query: 841 tcaattgacggaacaggacgaccagagttttcctgacatacaagtaccgtctccggatcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3423 tcaattgacggaacaggacgaccagagttttcctgacatacaagtaccgtctccggatcg 3482
Query: 901 tgttgacgatttcgatctaaatcaaggagatggtttgatggacaaggcaacggcaaacga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3483 tgttgacgatttcgatctaaatcaaggagatggtttgatggacaaggcaacggcaaacga 3542
Query: 961 agatgatatagatcacgtgattggtgatgagg-tgctgcsgtaa 1003
|||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 3543 agatgatatagatcacgtgattggtgatgaggttgctgccgtaa 3586
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7448
Number of Sequences: 1807
Number of extensions: 7448
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 1006
length of database: 10,358,551
effective HSP length: 16
effective length of query: 990
effective length of database: 10,329,639
effective search space: 10226342610
effective search space used: 10226342610
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)